PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19760.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 344aa    MW: 38355 Da    PI: 6.8547
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH222.9e-07275313548
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAv 48 
                 h+   ++RR+riN+++  L+ l+P+      +K++ +++Le+Av
  PIN19760.1 275 HSLCAKKRRERINERLRILQNLVPNG-----TKVDISTMLEEAV 313
                 667779******************97.....7**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MCSEEADFRA QLLGSCSLPN EVPSSSNFTV SSTFLPSHTP NMNGGGVGES AMYSSDKTNT  60
TMYSFSQGSS YSGSSSIIFP SSSPETSYPS FSHQIIAAHN NFMTMDYCMM GGKSNGSQVP  120
LLTNNVMEGD DFLNQDVCND SLESDRKLPD DFLQGKNFQF RKEHETVVPE PLGDDKTSSP  180
SEISKKRKYP PVEACKESFF FRHLCFMAFY LFPRSKRSMK LKKCAKVYDK DEDNNNNNNN  240
KNTVAELKWL LLKGNGAVNL NGKTRPGRDS ATDPHSLCAK KRRERINERL RILQNLVPNG  300
TKVDISTMLE EAVHSDDLWM YAPIAYNGTD IGLDLRISTP KSQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185226KKRKYPPVEACKESFFFRHLCFMAFYLFPRSKRSMKLKKCAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-27bHLH family protein