PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19692.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 536aa MW: 59601.1 Da PI: 7.3691

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.3e-33	220	277	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ d++++ei+Y+g+Hnh+k PIN19692.1 220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERNL-DGHITEIVYKGSHNHPK 277 8**************************************.*************85 PP
2	WRKY	102.5	2.4e-32	380	438	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+ +d ++v++tYeg+Hnh+ PIN19692.1 380 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYNGCPVRKHVERACHDSRAVITTYEGKHNHD 438 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MASSGGSLNT SVNLSNFSTS QYMTSFTDLL ATDQDKSALN WGLDSELANN HHKSIEIPKY 60 KSFTPSSLPV SPPPVSPSSY LSFPPSLSPS ILLDSPVLFS SSNVLPSPTT GSFAGLASKE 120 EERRYSDFSF QSETRPSNSS SNIFSSSAGM NSTDSFTRQQ HDGTFNKQPE FSTIKSGLKS 180 EAHGFSQEVQ TNMNTFSAPQ PTQMQYSQPT QYVRDNRKSD DGYNWRKYGQ KQVKGSENPR 240 SYYKCTFPNC PTKKKVERNL DGHITEIVYK GSHNHPKPQS TRRSSSNSTY NMGLPNQSNS 300 MLENAQMESV TTPENSSASF GDDEFEQGSS MSNSRDDDEN EPDTKRWKGE NETEGISASG 360 SRTVREPRIV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTYNG CPVRKHVERA 420 CHDSRAVITT YEGKHNHDVP AARGSGTYNM NRPPAMNAAI KPSVTSNHSK GINYPNPNRA 480 QPIQNQTPYT LQMLQNTDSF AFSGYGNSAY MNQMESGLSL AKEEPKDESF FDSFLN

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MASSGGSLNT SVNLSNFSTS QYMTSFTDLL ATDQDKSALN WGLDSELANN HHKSIEIPKY  60
KSFTPSSLPV SPPPVSPSSY LSFPPSLSPS ILLDSPVLFS SSNVLPSPTT GSFAGLASKE  120
EERRYSDFSF QSETRPSNSS SNIFSSSAGM NSTDSFTRQQ HDGTFNKQPE FSTIKSGLKS  180
EAHGFSQEVQ TNMNTFSAPQ PTQMQYSQPT QYVRDNRKSD DGYNWRKYGQ KQVKGSENPR  240
SYYKCTFPNC PTKKKVERNL DGHITEIVYK GSHNHPKPQS TRRSSSNSTY NMGLPNQSNS  300
MLENAQMESV TTPENSSASF GDDEFEQGSS MSNSRDDDEN EPDTKRWKGE NETEGISASG  360
SRTVREPRIV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTYNG CPVRKHVERA  420
CHDSRAVITT YEGKHNHDVP AARGSGTYNM NRPPAMNAAI KPSVTSNHSK GINYPNPNRA  480
QPIQNQTPYT LQMLQNTDSF AFSGYGNSAY MNQMESGLSL AKEEPKDESF FDSFLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	5e-85	WRKY family protein