PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19531.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 286aa MW: 32664.3 Da PI: 5.0171

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.8e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l+ ++q+G +W++ ++ g+ R++k+c++rw +yl PIN19531.1 16 KGPWSPAEDLRLISFIQQHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63 79****************************99**********97 PP
2	Myb_DNA-binding	52.9	8.4e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ ++++++ G++ W++Ia++++ gRt++++k+ w+++l PIN19531.1 69 RGNFTPEEEQTIINLHNTIGNK-WSKIASYLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MGKGRAPCCD KNKVKKGPWS PAEDLRLISF IQQHGHSNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTPEEEQTI INLHNTIGNK WSKIASYLPG RTDNEIKNVW NTHLKKRVMT 120 KKPNANHSTS QSSTSSSITS FENEIPENVT VEQGVQESEI EKPNEKLEFL NEASTSDSPT 180 STYTSSFFIP NEASEFSKSK GTSEDGKIEI PWESDIDFWE LFDSLESNTF NSTEKIDNDS 240 ECNKWIRVLE NELGLNQNQE MDLEKEISTG LDYFPIWPTS PQNLDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	4e-77	MYB family protein