PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19514.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 423aa MW: 46360.1 Da PI: 6.7866

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.7	4.8e-09	240	288	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq PIN19514.1 240 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 288 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MITMNNSISM VESSSCSASM VDSFCLPIWN QSVNGQSLGY CEMNAQTDAS PLSSLGPIRT 60 GLDWTTNGMF LPNGPRMLPQ NLPHFPTDSA FIQRAAKLSC FNGGNFSEMV NPFSIPLNPH 120 SQGFGLMQGP GEVLVGKHEK SESVVRSHDE AKNGVDVRGT RRDEAELSGR GAQEESSGKG 180 KKRKKNEQKI ENNEAPQPSL ETAKETAEQE SDQNTPSTHR SDPPKEEYIH VRARRGQATN 240 SHSLAERVRR EKISERMKFL QDLVPGCSKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT 300 VSPRLDFNNE QFLAKDQIPQ PRTGLSSSLA FSPSVTMPFP PLHLPHPSLI PASLPSIGNS 360 SETLQRLPGS AVCGGFNEPT CQTPRIWDNE LHNVIHNSFN STASLNSQDL SACLPPGHMK 420 AEP

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MITMNNSISM VESSSCSASM VDSFCLPIWN QSVNGQSLGY CEMNAQTDAS PLSSLGPIRT  60
GLDWTTNGMF LPNGPRMLPQ NLPHFPTDSA FIQRAAKLSC FNGGNFSEMV NPFSIPLNPH  120
SQGFGLMQGP GEVLVGKHEK SESVVRSHDE AKNGVDVRGT RRDEAELSGR GAQEESSGKG  180
KKRKKNEQKI ENNEAPQPSL ETAKETAEQE SDQNTPSTHR SDPPKEEYIH VRARRGQATN  240
SHSLAERVRR EKISERMKFL QDLVPGCSKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT  300
VSPRLDFNNE QFLAKDQIPQ PRTGLSSSLA FSPSVTMPFP PLHLPHPSLI PASLPSIGNS  360
SETLQRLPGS AVCGGFNEPT CQTPRIWDNE LHNVIHNSFN STASLNSQDL SACLPPGHMK  420
AEP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	185	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	9e-82	bHLH family protein