PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19383.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 657aa    MW: 73667.4 Da    PI: 5.2926
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS433.22e-1322926561374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalklfsevsPilkfs 94 
                 lv+lLl+cAeavs++d  la+++L +l+  +sp gd+mqR+aa+ft AL arla + ++  +a ++++    n       e l++++++++++P++kf+
  PIN19383.1 292 LVHLLLACAEAVSKEDYMLARRYLHHLNRVVSPLGDSMQRVAACFTDALTARLAATLTNKPSASNSKRF---NpfppdNLEILKIYQILYQACPYIKFA 387
                 68****************************************************955444444444444...233355999****************** PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 h+taNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    s e+++etg+ L+++A++l++pf+f++ v ++ledl++++
  PIN19383.1 388 HFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----SPEAVRETGRCLTELANSLHIPFDFHP-VGEELEDLKPHM 481
                 *******************************************************....9**************************.7*********** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                 ++ + gEalaVn+v +lhr++    +l     ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r+kvE+++l++
  PIN19383.1 482 FNRRVGEALAVNSVNRLHRVP--GNCLG----NLLAMIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQHILAP 574
                 ********************9..44444....5****************************************************************** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ei+ +va egaer+ rhe+lekWr+ +e  GF+ vpls++a++q k ll  ++ dgyr+ e++g+l+lgW+dr+L+++SaWr
  PIN19383.1 575 EIRHIVAEEGAERVLRHERLEKWRKIMEGKGFQGVPLSSNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRSLLAASAWR 656
                 *********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MGNLKNENSC TKQEPISPDR PSVLCEIKKN SSSSNFEVTH SLATPGLSLP PLKFEDNGDI  60
GLHSPDYSMW ESIFSDQLED DPMICSPVRN MPSNYTNYTP AIPGEILEWF SPPRFSSPRK  120
GKGLSPLSKV FNSPNNQFMQ IEQVESFSMQ SLENLLVDSY DNKGDDFAIY PQMKLSNGGE  180
LGSTYCYGVP ELLECLDMPN SMRFSGDVVS DEGSSQVTQE SGVYQQVESV APLSQQLQQE  240
RQLDRQQKQQ LPPPTLQRQH QQQLHQQNQL QNLQLMVPVL APEQEQDSGL QLVHLLLACA  300
EAVSKEDYML ARRYLHHLNR VVSPLGDSMQ RVAACFTDAL TARLAATLTN KPSASNSKRF  360
NPFPPDNLEI LKIYQILYQA CPYIKFAHFT ANQAIFEAFE AEERVHVIDL DILQGYQWPA  420
FMQALAARPG GAPFLRITGV GPSPEAVRET GRCLTELANS LHIPFDFHPV GEELEDLKPH  480
MFNRRVGEAL AVNSVNRLHR VPGNCLGNLL AMIRDQAPNI VTIVEQEASH NGPYFLGRFL  540
EALHYYSAIF DSLDATFPPD SAQRAKVEQH ILAPEIRHIV AEEGAERVLR HERLEKWRKI  600
MEGKGFQGVP LSSNAVTQSK ILLGLYSCDG YRLTEDKGCL LLGWQDRSLL AASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-95GRAS family protein