PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19298.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 329aa    MW: 35845.8 Da    PI: 6.8601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09243285855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ++RR+ri +++  L++l+P+       K++ +++LekA+ Y+k Lq
  PIN19298.1 243 AAKNRRERISERLKILQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 285
                 569*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MALANKDHMA NDSAMAIIQA SAFYDQNYGG PSLYGKNVCQ EPESPGKANG LAKNFTLSNS  60
SSVSSPSSTN SNGLGHQATS YNLSEEGHSV ISFKPDYGNF VYGSGSLLSF EHTKRVPRNL  120
YEKMMGEEDE YLAWEDDLNH PNGYQSQLNP KCGGLPETSN SHHDAAGYGG GLQFAWMKDH  180
EVDHAIADGI HEVGRQEAGN NKRPSMGEST QDLKKQCIVA SNNASKKPKP KLGSPSKDPQ  240
SVAAKNRRER ISERLKILQD LVPNGSKVDL VTMLEKAISY VKFLQLQVKV LATDEFWPAQ  300
GGKAPDLSQV REAIDAILAS QRDRNSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.15e-54bHLH family protein