PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19273.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 330aa    MW: 37045.2 Da    PI: 9.4392
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85.2e-08274315443
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      W++ Ed+ l++a k ++++   +W++Ia+ ++ g+t   c  r
       PIN19273.1 274 WSAVEDLALLNALKAFPKDvamRWEKIAASVP-GKTKSACMKR 315
                      ********************************.****999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEFLDEFESR PRFVFQSKQL PQPTDSDDVL HSSSSSFLYS LHKPTLLISL SLSLVSLGLA  60
FLYFNFEPLK SLLLWLSLSL LVGPFAPPSL TAGDIRVGLG PPLKESPKIS TETPAKFNQK  120
STRTLKKTSE DAPRFDRYVE KSTTIDRSFF ESAENQSNRF NASSTENKFE VKSEWNEADE  180
ELLRKLMGKH PVGKPGRWEA IAEGFKGKHK VETIISKAKE MGGMKVSDQD SYKKFLKDRK  240
PVDKRVLDEG ENEPNSELGM ADQNLEEGRK EIGWSAVEDL ALLNALKAFP KDVAMRWEKI  300
AASVPGKTKS ACMKRVAELK KDFRSSKGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-66MYB_related family protein