PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GATA | ||||||||
Protein Properties | Length: 159aa MW: 17116.3 Da PI: 10.4536 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 59 | 6.4e-19 | 33 | 67 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++ PIN19239.1 33 CVDCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 67 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MDLSDKGSEC EEMSSQTPTP DRVSSDGSNV KTCVDCGTSK TPLWRGGPAG PKSLCNACGI 60 RSRKKRRALM GVTKEEKKTK KSSSGKNISH QSLSSNSSTS SSGDSTSKIG DSFKKKLWAF 120 GRDVALQRPR SNTTRRRKLG EEEQAAFLLM ALSCGSVYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 4e-33 | GATA family protein |