PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19209.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 328aa    MW: 36870 Da    PI: 5.2876
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.92.1e-33176234159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+ver+++dp++v++tYeg+H+h+
  PIN19209.1 176 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSTACGVKKRVERCSDDPSIVVTTYEGTHTHP 234
                 59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDEKLKKPEI NSIDKAVFSN QIMINPESSL SFSMPSSLFD VSCEEAADNQ KSCLGFVDML  60
GVQDFNCPAY STFDDLFQNI TAQLVPLESQ QPTSQPLPSP VPEYSEVVNT PATPNSSSIS  120
SSSNDDQKKN ENEDQDEEEE NQEKTTKKES KPKKKNQKRE REPRFAFMTK SEIDHLDDGY  180
RWRKYGQKAV KNSPFPRSYY RCTSTACGVK KRVERCSDDP SIVVTTYEGT HTHPCPITPR  240
GSFGIMPETT TYGSAGGGGG GFSSSHFVNM PQMLHYQQPY FQNLMSNTTN TAFRQERPFC  300
PSATSLVRDH GLLQDMVPSK MLKEPKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.19e-49WRKY family protein