PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 164aa MW: 18586 Da PI: 5.8204 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.4e-19 | 71 | 121 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp k r +lg++ t+eeAa a+++a+ kl+g PIN19005.1 71 SYRGVRRRP-WGKFAAEIRDP---DrKGYRLWLGTYETPEEAALAYDQAAFKLRG 121 69*******.**********8...3245*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MDLALLDSIQ NYLLSDFDFP QDFQCNNIAI PVSDDDQFSS QMIEELLCND SKEVDASSEG 60 VVNALPVDWK SYRGVRRRPW GKFAAEIRDP DRKGYRLWLG TYETPEEAAL AYDQAAFKLR 120 GSRARVNFPH LVGSGVELTR VTKRSHGSLD RPNVNPKKMK MAMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-35 | ERF family protein |