PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18946.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 367aa    MW: 40645.2 Da    PI: 5.9241
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.4e-21171221256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  PIN18946.1 171 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 221
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MAAAIDIYGS GINQAFSVDP FREELMEALQ PFMKSASSSS SSNIPSDNFF SSPSPSTSCS  60
SHYMPLESNS YPGFSSIPSR TQLFSPGFSS FNQMGNEQNL GTVGLNHLTP SQILQIQAQF  120
QLQQQQIQQQ QQQLNYKLIQ LNNHHNTFSS FLGPKPVPMK QPGTPSKPTK LYRGVRQRHW  180
GKWVAEIRLP KNRTRLWLGT FDTAEEAALA YDKAAYKLRG EFARLNFPQL RHQLSRDSSD  240
FKPLHSTVDA KLQAICESLK QGNSGKVDQK LEISSKNGVS KVENSSNDSS NGGLRYTGLN  300
ESVKVEPEQE PEPSMSSSPS DEGSFAGSAS PESDITFLDF PEPSSFDECD NLVLQKFPSV  360
EIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-53ERF family protein