PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18766.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 329aa MW: 36403.8 Da PI: 8.0585

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.3e-06	166	185	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ PIN18766.1 166 FSCHLCSKTFNRYNNLQMHM 185 89*****************9 PP
2	zf-C2H2	15.8	4.1e-05	250	272	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ PIN18766.1 250 FMCRKCGKPFAVKGDWRTHEKNC 272 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MREPYYNFST GCFNFIPLHN NSQYSSSSSS SSSPPPKQAL PLLNSLTQQP SSSSCNNIND 60 PIMSEKSTIC STNYYSTSGS GSGSGSDENV TIALQIGLPI VSPNNSDLGS SGIINSSSVN 120 GDEEIMMDKG ESHMDILSGL PLNRLNMGGQ YWIPTPSQIL IGPTQFSCHL CSKTFNRYNN 180 LQMHMWGHGS QYRKGPESLR GTQPTAMLRL PCYCCSPGCK HNIDHPRARP LKDFRTLQTH 240 YKRKHGTKPF MCRKCGKPFA VKGDWRTHEK NCGKIWYCVC GSDFKHKRSL KDHIKAFGRG 300 HGAYGIECEF DEEDESASEI EQGGESNST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-118	C2H2 family protein