PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN18730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Trihelix | ||||||||
Protein Properties | Length: 327aa MW: 37138.2 Da PI: 10.1429 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.4 | 1.9e-18 | 40 | 128 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt +e+ aLi+a+re++ +++rg+l++ +W+e ++ + ++ ++ ++++qC++k+e+l+kry+ +++ r + s++++f+++e PIN18730.1 40 CWTLEETVALIDAYREKWYSVNRGNLRASHWQEMADEVaSRCPVspPKTAVQCRHKMEKLRKRYRGKVQRAAARGVVRCSSWAHFQNME 128 7*************************************5333444489*****************9999999997778889******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MAMILRPSSH SPNDEDDRNI PTAEVAFPFA SLSRRLPPPC WTLEETVALI DAYREKWYSV 60 NRGNLRASHW QEMADEVASR CPVSPPKTAV QCRHKMEKLR KRYRGKVQRA AARGVVRCSS 120 WAHFQNMESM EKGPNNTSPS SSTSEEEDDR KNSIRRINEL YNHSNIQKGL FSNQGDFING 180 IAPGFRIKIP GGAPPAPTKV YGKFNRMDGQ NPNNSNPRFP NSIANGYGAA SNKDLRDRLI 240 ERDEKRNRVG GISKKNKVDT GVDEVVAAIH ALREGFMRIE KAKMDMTIQI EEMRMEMELK 300 KAESQQMLVE TLAKAIYENS CKKPRRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 4e-53 | Trihelix family protein |