PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18721.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 667aa MW: 74591.2 Da PI: 6.4775

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.6	4.3e-22	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++ +++a+e+ +++ ++l+ d+++++W +++i+r++++r++lt+GW+ Fv+a++L +gD ++F + +++el PIN18721.1 127 FCKTLTASDTSTHGGFSVLRRHADEClppldmsQQP--PWQELVASDLHSNEWHFRHIFRGQPKRHLLTTGWSVFVSAKKLVAGDAFIFL--RGENGEL 221 99**************************964333..4459*********************************************..449999 PP EEEEE- CS B3 93 vvkvfr 98 +v+v+r PIN18721.1 222 RVGVRR 227 ****97 PP
2	Auxin_resp	116.4	2.4e-38	253	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seF+v+++k+++a + k+svGmRfkm+fe+e+++e+r+sGt+vg++d++++rWpnS+WrsLk PIN18721.1 253 ASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEAKNLKFSVGMRFKMRFEGEEVPEKRFSGTIVGIEDYSSSRWPNSEWRSLK 335 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MVHFAAGHSA GEPPPGASNE ALYKELWHAC AGPLVTLPRE GERVYYFPQG HMEQLEASTH 60 QGLDQQLPSF NLPSKILCKV MNVNLRAEKE TDEVYAQITL IPEKDQGEVK SPDTPPDEPP 120 RCTVHSFCKT LTASDTSTHG GFSVLRRHAD ECLPPLDMSQ QPPWQELVAS DLHSNEWHFR 180 HIFRGQPKRH LLTTGWSVFV SAKKLVAGDA FIFLRGENGE LRVGVRRLMR QLNNMPSSVI 240 SSHSMHLGVL ATASHAISTG TLFSVFYKPR TSRSEFIVSL NKYLEAKNLK FSVGMRFKMR 300 FEGEEVPEKR FSGTIVGIED YSSSRWPNSE WRSLKVQWDE PSSILRPDRV SPWEIEPIVT 360 ATPANLQTQQ RNKRARPTIL TSRAQDLSSL GMWKSPAEAP SAFSYRDLSH ERDLYESPKL 420 ASGTRINTMN YNENLLPVSS NAGYQHQLEN VAESVAPVPV GEKRLANGCR LFGIELLDHS 480 IVADSPPAVL SGVAVEDSHI PSLDTDSEQH SEPSNRNLSN VPSGNRDPDK SCLRSPHEPY 540 GRQNRSCIKV HMQSIAVGRA VDLTRFDCYE DLLKKLEEMF EIVGELSGSS KKWQVVYTDD 600 ENDMMLVGDD PWHEFCTMAK KIYIYTTEEA RRLSPKIKLP LGEVKTSKLL SDAAVGTDEE 660 SPGMGGS

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MVHFAAGHSA GEPPPGASNE ALYKELWHAC AGPLVTLPRE GERVYYFPQG HMEQLEASTH  60
QGLDQQLPSF NLPSKILCKV MNVNLRAEKE TDEVYAQITL IPEKDQGEVK SPDTPPDEPP  120
RCTVHSFCKT LTASDTSTHG GFSVLRRHAD ECLPPLDMSQ QPPWQELVAS DLHSNEWHFR  180
HIFRGQPKRH LLTTGWSVFV SAKKLVAGDA FIFLRGENGE LRVGVRRLMR QLNNMPSSVI  240
SSHSMHLGVL ATASHAISTG TLFSVFYKPR TSRSEFIVSL NKYLEAKNLK FSVGMRFKMR  300
FEGEEVPEKR FSGTIVGIED YSSSRWPNSE WRSLKVQWDE PSSILRPDRV SPWEIEPIVT  360
ATPANLQTQQ RNKRARPTIL TSRAQDLSSL GMWKSPAEAP SAFSYRDLSH ERDLYESPKL  420
ASGTRINTMN YNENLLPVSS NAGYQHQLEN VAESVAPVPV GEKRLANGCR LFGIELLDHS  480
IVADSPPAVL SGVAVEDSHI PSLDTDSEQH SEPSNRNLSN VPSGNRDPDK SCLRSPHEPY  540
GRQNRSCIKV HMQSIAVGRA VDLTRFDCYE DLLKKLEEMF EIVGELSGSS KKWQVVYTDD  600
ENDMMLVGDD PWHEFCTMAK KIYIYTTEEA RRLSPKIKLP LGEVKTSKLL SDAAVGTDEE  660
SPGMGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein