PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18573.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 268aa MW: 31596.8 Da PI: 9.5582

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	90.4	2.1e-28	1	86	9	103
HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103 +l ++e+++++sws++g+sfv+ ++++fa +vLp yF+h+nf+SFv QLn YgFkk++ e+ we+++++F++g+++ll++ikr++++ PIN18573.1 1 MLGNNETNSIVSWSTTGTSFVINNPHSFAANVLPIYFRHRNFQSFVTQLNSYGFKKISWEQ---------WEYRNDNFRRGERHLLRNIKRRNQQ 86 8999****************************************************998.........********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MLGNNETNSI VSWSTTGTSF VINNPHSFAA NVLPIYFRHR NFQSFVTQLN SYGFKKISWE 60 QWEYRNDNFR RGERHLLRNI KRRNQQIPHR NHPSSQTEPF LTTSSCSSLA EKELEITMKE 120 HDLLKLEITK LKEKQGNLEQ KLKKKKKQAF RNRNDQQRMM FVFVAQRIIG KQKDHIQIPD 180 EKNLKEKRKM EEKSPLMCTD SGNIPMVNIV EMISEHFTRQ GETALDEEDQ MGKDQSNMFI 240 SLEDLIGESS DWVEYVRELQ EKASQIKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	173	KKKKKQAFRNRNDQQRMMFVFVAQRIIGKQK
2	144	174	KKKKKQAFRNRNDQQRMMFVFVAQRIIGKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G63350.1	1e-31	HSF family protein