PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN18287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GRF | ||||||||
Protein Properties | Length: 178aa MW: 20130.2 Da PI: 10.2867 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 71.6 | 9.2e-23 | 91 | 132 | 1 | 42 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrks 42 d+ep+rCrRtDGKkWRCsr+v+eg+k+C +H+hrgr r r+ PIN18287.1 91 DPEPRRCRRTDGKKWRCSRNVVEGQKYCSSHMHRGRLRPRNN 132 79************************************9986 PP | |||||||
2 | QLQ | 46.3 | 1.3e-16 | 28 | 62 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Qlq+L+ Q l+y y+ a+ PvP +L+++i++ PIN18287.1 28 FTWMQLQELELQSLIYNYIKAGIPVPTHLILPIWR 62 9********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEAPSPPCKI SRVIQSGKAT AARVKHGFTW MQLQELELQS LIYNYIKAGI PVPTHLILPI 60 WRSFAGCIAH QIYPNCLGYN PLYFDPKSSM DPEPRRCRRT DGKKWRCSRN VVEGQKYCSS 120 HMHRGRLRPR NNLQPPPAAT AAEETCSTNK FSSTNLSIPC SSKVKRVTQG YDPIRGNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36400.1 | 3e-30 | GRF family protein |