PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17992.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 268aa    MW: 30553.8 Da    PI: 7.6036
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.58.6e-17156256198
                 EEEE-..-HH.HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdv.lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+l+ sd+ lk++rl++pk++ae++    +     +  ++++d++g++We+ ++y+ ++g+  yvl+ G +++  +++ + gD+v+F++++  +++ 
  PIN17992.1 156 FEKILSASDAdLKLARLIIPKRCAEAFfpnlS--GLHGLHIKMQDTEGNEWEFHYRYWINGGSriYVLE-GLRDYMVSKQWQPGDTVTFYRVE-PGGKV 250
                 89999999972466************9**663..445668*****************776666668888.********************765.66666 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                 v+++++
  PIN17992.1 251 VMGLRK 256
                 666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MASTSRMSCF QCQVSSFKPD HFRNGWRLHI GQYAQLCPRC ASVYEEGRFC ETFHSNDDGW  60
RDCESCGKLV HCGCIVSFNT HLLLDFGGII CLECSRFNFL LARNRCLSLE PEIRDRESYQ  120
EPSGQAAVEA QYWSRVTDLE LQQVSRNPKS TVTPLFEKIL SASDADLKLA RLIIPKRCAE  180
AFFPNLSGLH GLHIKMQDTE GNEWEFHYRY WINGGSRIYV LEGLRDYMVS KQWQPGDTVT  240
FYRVEPGGKV VMGLRKTSAS PQPAASKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.13e-42B3 family protein