PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17931.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 291aa    MW: 31128.2 Da    PI: 5.3343
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.92.7e-16111157455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PIN17931.1 111 VHNLSEKRRRSRINEKLKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 157
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSDLYGSSES EDMSSFLQIL LQNSSSAATT DSTTASAAAG GLFSRGGAVA ESSTSINFSD  60
PNPYFAGESD GLNSSSRVKN LGSTSEGPEA CDVPATSAPP RSSKRSRAAE VHNLSEKRRR  120
SRINEKLKAL QNLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLTMRNGLS LHPGYSLGSL  180
QSMLAPSTGL ELDEGNLLLN ANRGTNTHQD FILQNALEPT NQSSSSMPMF MPSTTNTPNS  240
DNLPSYVQAA QNHYGLLNHL TSTKDICRDD TLSRLQLDRS SGNNSSPGVS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-35bHLH family protein