PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17911.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 270aa    MW: 30876.1 Da    PI: 7.3515
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.83.1e-16156256198
                 EEEE-..-HHH.HTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
          B3   1 ffkvltpsdvl.ksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                 f+kvl+ sd+  k++rl++pk++ae++     g     +  ++++d +g++We+ ++y+ ++g+  yvl+ G +++  +++ + gD+v+F++++  +++
  PIN17911.1 156 FEKVLSASDADlKLARLIIPKRCAEAFfpdisG---LHGLHIKIQDIEGNEWEFHYRYWINGGSriYVLE-GLRDYMVSKQWQPGDTVTFYRVE-PGGK 249
                 89999999975166**************96632...35668*****************776666668888.********************765.6666 PP

                 .EEEEE- CS
          B3  92 lvvkvfr 98 
                  v+++++
  PIN17911.1 250 VVMGLRK 256
                 6666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MASSSRMSCF QCQDSSSKLD RFRNGWRLHS GHYAQLCPRC ASVYEEGRFC ETFHSNDDGW  60
RDCESCGKLV HCGCIVSFNT HLLLDFGGII CMECSRFNFL LARNRCLSLE PEIRDRESYQ  120
ESSGQAAVES QYWSRVTDLE LQQVSRNPKS TVTPLFEKVL SASDADLKLA RLIIPKRCAE  180
AFFPDISGLH GLHIKIQDIE GNEWEFHYRY WINGGSRIYV LEGLRDYMVS KQWQPGDTVT  240
FYRVEPGGKV VMGLRKTSAS PQLPKCDKLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.12e-44B3 family protein