PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17753.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 449aa MW: 48604.6 Da PI: 4.9012

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7.3e-31	223	281	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PIN17753.1 223 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 281 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MENYQGDLTD IIRATGSSIA AAAANTAAEA AALPAEWQFP NNPVNYPPDQ VEDFGDPFTH 60 LRDPLLHDVD TPVSSGFFHN TNIIKTSVEL ETVNTGGFVN GSMNLAQKVV LDDEMKRPSN 120 IFSRMLQISP NAKLPLSPCD SPAVVVPQLP PQAAASPRGL TGPPPMLISN DHHTLISPGS 180 PSLQISSPRN TGIKRRKSQA KKVVCIPAPA PANSRSSGEV VPSDLWAWRK YGQKPIKGSP 240 YPRGYYRCSS SKGCSARKQV ERSRTDPNML VITYTSEHNH PWPTQRNALA GSTRSQPSKT 300 NTAAKNSPNS RAQKCTNPKE EQKEMITTEN AVMPSSSNLD APVKEEMDQD FDNQMDDADE 360 GFPHSYKPAL PDSEDHDSFF ADLGEIEADS LDMLFTQGFS GDDGREDKAL DPFSFYDWAG 420 NNSSTSAGAA TSTTGAGSSY GEDRKDPDS

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MENYQGDLTD IIRATGSSIA AAAANTAAEA AALPAEWQFP NNPVNYPPDQ VEDFGDPFTH  60
LRDPLLHDVD TPVSSGFFHN TNIIKTSVEL ETVNTGGFVN GSMNLAQKVV LDDEMKRPSN  120
IFSRMLQISP NAKLPLSPCD SPAVVVPQLP PQAAASPRGL TGPPPMLISN DHHTLISPGS  180
PSLQISSPRN TGIKRRKSQA KKVVCIPAPA PANSRSSGEV VPSDLWAWRK YGQKPIKGSP  240
YPRGYYRCSS SKGCSARKQV ERSRTDPNML VITYTSEHNH PWPTQRNALA GSTRSQPSKT  300
NTAAKNSPNS RAQKCTNPKE EQKEMITTEN AVMPSSSNLD APVKEEMDQD FDNQMDDADE  360
GFPHSYKPAL PDSEDHDSFF ADLGEIEADS LDMLFTQGFS GDDGREDKAL DPFSFYDWAG  420
NNSSTSAGAA TSTTGAGSSY GEDRKDPDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-91	WRKY family protein