PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17682.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 301aa    MW: 31904.4 Da    PI: 6.864
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.9e-17218254135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  PIN17682.1 218 CRHCGISSksTPMMRRGPDGPRTLCNACGLKWANKGV 254
                 *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MYGPPIASAS NDGSNLEQHG ANTTAHIDVE QDDGDVNGDG SVDNAPSQIR YDPANSSHSL  60
GVVEAVGSHA LFGSDVAPAA AGEAGSDYLT LSFQGEVYVF DSVSPQKVQA VLLLLGGCEV  120
PTAIPTTGIA PQNHVNLGEY PGRSSQPQRA ASLNRFREKR KERCFDKKIR YTVRKEVALR  180
MQRKKGQFTS SKSVSDEPSS SSADWNGNSG QEEQETLCRH CGISSKSTPM MRRGPDGPRT  240
LCNACGLKWA NKGVLRDILK VPIVGMQHQA TKASEVLNGQ DSGKGAAIPA ANAIIPSNGD  300
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-79GATA family protein