PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17672.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 294aa MW: 33113.1 Da PI: 7.8364

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.6e-13	122	167	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++N++f L ++P + kK++Ka++L +A++++k+Lq PIN17672.1 122 HILAERKRREKLNQRFISLSAIVPGL-----KKMDKASVLGEAIKHLKQLQ 167 7889********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MEISSFRSLA ELGMDDPLSF QQWPLEELIY ASNASLFSQD FHPSFSQQVV MDFKRAPDLS 60 QEGIKNTIWS SCKLENTSSS SNTLNLPSES VLPQSSLVNQ SFITKQAKNT RAKTKIADAP 120 DHILAERKRR EKLNQRFISL SAIVPGLKKM DKASVLGEAI KHLKQLQEKV KILEDQTKKT 180 SMESVVFVKK YEVYGDDGEN SYSGPMITEQ LPEIEARFCN KDVLIIIHCE KRKGIVEKAV 240 AVIEKLHLSV VNSCVMSFGD CALNITLTAQ KDENCTMNVK ELVKNIRDAI KFHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	131	ERKRRE
2	127	132	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-55	bHLH family protein