PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17454.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 293aa    MW: 32728.4 Da    PI: 7.7317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.12.4e-16118164455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  PIN17454.1 118 VHNLSERRRRDRINEKMRALQELIPHS-----NKSDKASMLDEAIEYMKSLQ 164
                 5*************************7.....59*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MRTIGSSHCA SNQVVNDVDM SWESSRTLEE NYAQKVSPQY ESTERETHGQ AITSSSGGSG  60
SSIWKTSSQS NDTNRHKRKS RDMEESECRS DATELESAAA NKSSQKSGTT RRSRVAEVHN  120
LSERRRRDRI NEKMRALQEL IPHSNKSDKA SMLDEAIEYM KSLQFQLQLM WMESGMAPMM  180
LPGMQHYMSR VGMGIGSPML PAIQNLMRLS RLPLVDQVSP NPNQTQIGQG PVLGPVNYQN  240
QMQNSSFPEQ YANYMGFHSM PNTSQPINMF NFGPHSSQQN QESVPPGNGS GST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43010.21e-45bHLH family protein