PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17430.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 431aa    MW: 48655.8 Da    PI: 6.0525
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS311.71.6e-95454282373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 ++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+  f++AL ar a+s++ +l  a++  + s +n++ ++  l  f++++P+++f++ +aN
  PIN17430.1  45 EQLLVHCATAIENNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARSAKSGNcKLLMAMANVDLSMHNHKFSIIELASFVDLTPWHRFGFTAAN 143
                 79***************************************************955426777888888888889999999999**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrled 188
                  a+leaveg + vHi+D+++++++Q p+L++++a+R e pp +++T+ g++e        ++ee+g++L +fA++ +v +ef+v+        ++ +e+
  PIN17430.1 144 AAVLEAVEGYSVVHIVDLSLTHCMQIPTLIDSIATRLEVPPLVKLTVAGAMEDYppmLDLSYEELGSKLVNFARSRNVIMEFRVIpssssngFSSLIEQ 242
                 **************************************************887798888999***********************88755555555666 PP

        GRAS 189 leleeLrvkp.gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                 l++++L  ++ gEal++n++++lh++++e++s+e+   r+ +Lk++++l P+++v+v+++ad +s+++++r+ +a +y +  +d++++ lpr s++r++
  PIN17430.1 243 LRMQHLVSSQnGEALVINCHMMLHYIPEETLSIENasLRTMFLKALRGLDPTIIVLVDEDADFTSNNLVNRLRSAYNYLWIPYDTMDTFLPRGSKQRQW 341
                 66766654447**********************998889************************************************************ PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +E+  + ++i+nv+++eg +r+er et +kW +r+++a F+ v++se+a +++k +l +++  g+ +++e++ +vl+Wk++++v+++aW
  PIN17430.1 342 YEAD-ICWKIENVISHEGPQRVERPETRSKWVQRMRNASFRGVAFSEDAISEVKNMLDEHA-AGWGLKKEEEDIVLTWKGHNVVFATAW 428
                 ****.********************************************************.899************************ PP

Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MMQFTDPFPP SPLHQMNKNQ TFRARPWPGF PTSSKSFIGD ANCMEQLLVH CATAIENNDA  60
TLAQQILWVL NNIAPPDGDS NQRLTCGFLR ALIARSAKSG NCKLLMAMAN VDLSMHNHKF  120
SIIELASFVD LTPWHRFGFT AANAAVLEAV EGYSVVHIVD LSLTHCMQIP TLIDSIATRL  180
EVPPLVKLTV AGAMEDYPPM LDLSYEELGS KLVNFARSRN VIMEFRVIPS SSSNGFSSLI  240
EQLRMQHLVS SQNGEALVIN CHMMLHYIPE ETLSIENASL RTMFLKALRG LDPTIIVLVD  300
EDADFTSNNL VNRLRSAYNY LWIPYDTMDT FLPRGSKQRQ WYEADICWKI ENVISHEGPQ  360
RVERPETRSK WVQRMRNASF RGVAFSEDAI SEVKNMLDEH AAGWGLKKEE EDIVLTWKGH  420
NVVFATAWVP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein