PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN17430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 431aa MW: 48655.8 Da PI: 6.0525 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 311.7 | 1.6e-95 | 45 | 428 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalklfsevsPilkfshltaN 99 ++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+ f++AL ar a+s++ +l a++ + s +n++ ++ l f++++P+++f++ +aN PIN17430.1 45 EQLLVHCATAIENNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARSAKSGNcKLLMAMANVDLSMHNHKFSIIELASFVDLTPWHRFGFTAAN 143 79***************************************************955426777888888888889999999999**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrled 188 a+leaveg + vHi+D+++++++Q p+L++++a+R e pp +++T+ g++e ++ee+g++L +fA++ +v +ef+v+ ++ +e+ PIN17430.1 144 AAVLEAVEGYSVVHIVDLSLTHCMQIPTLIDSIATRLEVPPLVKLTVAGAMEDYppmLDLSYEELGSKLVNFARSRNVIMEFRVIpssssngFSSLIEQ 242 **************************************************887798888999***********************88755555555666 PP GRAS 189 leleeLrvkp.gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 l++++L ++ gEal++n++++lh++++e++s+e+ r+ +Lk++++l P+++v+v+++ad +s+++++r+ +a +y + +d++++ lpr s++r++ PIN17430.1 243 LRMQHLVSSQnGEALVINCHMMLHYIPEETLSIENasLRTMFLKALRGLDPTIIVLVDEDADFTSNNLVNRLRSAYNYLWIPYDTMDTFLPRGSKQRQW 341 66766654447**********************998889************************************************************ PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +E+ + ++i+nv+++eg +r+er et +kW +r+++a F+ v++se+a +++k +l +++ g+ +++e++ +vl+Wk++++v+++aW PIN17430.1 342 YEAD-ICWKIENVISHEGPQRVERPETRSKWVQRMRNASFRGVAFSEDAISEVKNMLDEHA-AGWGLKKEEEDIVLTWKGHNVVFATAW 428 ****.********************************************************.899************************ PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 431 aa Download sequence |
MMQFTDPFPP SPLHQMNKNQ TFRARPWPGF PTSSKSFIGD ANCMEQLLVH CATAIENNDA 60 TLAQQILWVL NNIAPPDGDS NQRLTCGFLR ALIARSAKSG NCKLLMAMAN VDLSMHNHKF 120 SIIELASFVD LTPWHRFGFT AANAAVLEAV EGYSVVHIVD LSLTHCMQIP TLIDSIATRL 180 EVPPLVKLTV AGAMEDYPPM LDLSYEELGS KLVNFARSRN VIMEFRVIPS SSSNGFSSLI 240 EQLRMQHLVS SQNGEALVIN CHMMLHYIPE ETLSIENASL RTMFLKALRG LDPTIIVLVD 300 EDADFTSNNL VNRLRSAYNY LWIPYDTMDT FLPRGSKQRQ WYEADICWKI ENVISHEGPQ 360 RVERPETRSK WVQRMRNASF RGVAFSEDAI SEVKNMLDEH AAGWGLKKEE EDIVLTWKGH 420 NVVFATAWVP V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49950.1 | 0.0 | GRAS family protein |