PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GRAS | ||||||||
Protein Properties | Length: 466aa MW: 52669.7 Da PI: 6.1075 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 469.9 | 1.3e-143 | 46 | 463 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lL++cA++v+sg+le+a+ +L ++s+laspdgd+mqR+a+yf eALa r++++++++yka+++++ s ++ee+ ++k+f+e P++k+++++ N PIN17416.1 46 LIHLLVTCANHVASGSLENANIALDQISHLASPDGDTMQRIASYFSEALADRILKTWPGVYKAFRSTKIS--VVAEEILVRKMFFEFLPFMKVAFVISN 142 689*************************************************************999987..6************************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaI ea+ege++vH+iD+++++++QW aL++ L++Rpegpp+lRiT++++ +ke le++++ L++ Ae+l++pf+fn+ ++++le+l++e+Lrvk+ PIN17416.1 143 QAIIEAMEGEKMVHVIDLNATEPAQWCALIRDLSARPEGPPHLRITAIHQ----QKEVLEQMAHVLTEEAEKLDLPFQFNP-LVSKLENLDIEKLRVKT 236 **************************************************....9**************************.5999************* PP GRAS 199 gEalaVnlvlqlhrll....................................................desvsleserdevLklvkslsPkvvvvveqe 245 gEala+++++qlh+ll +s++l++ +d++L+++++lsPkv+vv+eq+ PIN17416.1 237 GEALAISSIMQLHTLLasndvrnrspstpmnvhlqrvaqmnqstlgellekdmvngyspsndsassspLSSMPLPK-IDSFLSALWGLSPKVMVVTEQD 334 *************************************************************997755555555555.********************** PP GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344 +dhn++s++er++e+l++y+alfd+le+ lpr+s er k+E++llg+ei++++acegaer++rhe+lekW++r++ aGF +vpls++a+ qak+ll+ + PIN17416.1 335 SDHNGKSLMERLSESLYFYAALFDCLESALPRASLERLKMEKMLLGEEIRDIIACEGAERKQRHEKLEKWNQRFDLAGFANVPLSYYAMLQAKRLLQSF 433 *************************************************************************************************** PP GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + dgy+++ee+g++v++W+drpL+svSaWr PIN17416.1 434 NCDGYKIKEEHGCVVICWQDRPLFSVSAWR 463 *****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MFQEDGSSSV TSSPLQMFPM MSLSPGPMSP YPWLKDLKPE ERGLYLIHLL VTCANHVASG 60 SLENANIALD QISHLASPDG DTMQRIASYF SEALADRILK TWPGVYKAFR STKISVVAEE 120 ILVRKMFFEF LPFMKVAFVI SNQAIIEAME GEKMVHVIDL NATEPAQWCA LIRDLSARPE 180 GPPHLRITAI HQQKEVLEQM AHVLTEEAEK LDLPFQFNPL VSKLENLDIE KLRVKTGEAL 240 AISSIMQLHT LLASNDVRNR SPSTPMNVHL QRVAQMNQST LGELLEKDMV NGYSPSNDSA 300 SSSPLSSMPL PKIDSFLSAL WGLSPKVMVV TEQDSDHNGK SLMERLSESL YFYAALFDCL 360 ESALPRASLE RLKMEKMLLG EEIRDIIACE GAERKQRHEK LEKWNQRFDL AGFANVPLSY 420 YAMLQAKRLL QSFNCDGYKI KEEHGCVVIC WQDRPLFSVS AWRYRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |