PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17407.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 479aa MW: 54622.5 Da PI: 8.5063

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	17	72	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le+++++ +yp+++++ +LA+++gLte+qV+ WF+ rR k+k+ PIN17407.1 17 KKRTVKTRAQVQALEKFYNERKYPTESMKIQLAESIGLTEKQVSGWFCHRRLKDKR 72 8*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MSEVHSEDDK GFPEKNKKRT VKTRAQVQAL EKFYNERKYP TESMKIQLAE SIGLTEKQVS 60 GWFCHRRLKD KRLMNGENNI VGRQDWSSGV IQDHGSGHKQ DSCGSSKQGD DKNLDREVES 120 GRLPLQECSA AELTYERGVH YCGNHTRMDD ASSGSSSSLR NMSNHNHKGE PIDVATSRYL 180 IPKYPMDLKP RSGPSGYLKV KGRVENAAIT AVKRQLGKDY REDGPPLGVE FDPLPPGAFE 240 YSMQDSVDET CYNREAFLSV PPDISKFHQH PKFSKGPEYY SGTCHNSNII RTSFKATQGS 300 DIPDNYINER FRQSASLSNT GAYYSRRNSF VELPDVPGRD ISDDYGMRYR QPFCGKLRGE 360 TESSFHNYND VHRKSSKGET IENRPSNLNL KIFKCHNLFD NTQPRRIAKD GRSYAERRMI 420 NENQAPKRMR DEFHQQPHLK RASMLENQPG TYRVMRHEAQ MPSSYSEDEG SAETSTSVE

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MSEVHSEDDK GFPEKNKKRT VKTRAQVQAL EKFYNERKYP TESMKIQLAE SIGLTEKQVS  60
GWFCHRRLKD KRLMNGENNI VGRQDWSSGV IQDHGSGHKQ DSCGSSKQGD DKNLDREVES  120
GRLPLQECSA AELTYERGVH YCGNHTRMDD ASSGSSSSLR NMSNHNHKGE PIDVATSRYL  180
IPKYPMDLKP RSGPSGYLKV KGRVENAAIT AVKRQLGKDY REDGPPLGVE FDPLPPGAFE  240
YSMQDSVDET CYNREAFLSV PPDISKFHQH PKFSKGPEYY SGTCHNSNII RTSFKATQGS  300
DIPDNYINER FRQSASLSNT GAYYSRRNSF VELPDVPGRD ISDDYGMRYR QPFCGKLRGE  360
TESSFHNYND VHRKSSKGET IENRPSNLNL KIFKCHNLFD NTQPRRIAKD GRSYAERRMI  420
NENQAPKRMR DEFHQQPHLK RASMLENQPG TYRVMRHEAQ MPSSYSEDEG SAETSTSVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-67	HB-other family protein