PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | C2H2 | ||||||||
Protein Properties | Length: 257aa MW: 28037.3 Da PI: 6.4237 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.0001 | 12 | 34 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C k+F++ L H r H PIN16917.1 12 FQCPFCEKRFKNGKALGGHKRIH 34 89*****************9998 PP | |||||||
2 | zf-C2H2 | 18.6 | 5e-06 | 61 | 82 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kCp C++ F+ L+ H+r+H PIN16917.1 61 KCPVCDQAFPAEKALHGHMRKH 82 8********************9 PP | |||||||
3 | zf-C2H2 | 12.7 | 0.00038 | 184 | 206 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C+++F++ L H + H PIN16917.1 184 YVCDICDRRFKSYQALGGHKSHH 206 9***********99998887766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MSNEAGENEA AFQCPFCEKR FKNGKALGGH KRIHLLQAKN ESGETSNPEV IPDAESVETL 60 KCPVCDQAFP AEKALHGHMR KHPDRSWRGM KPPVPAGEDV ENNLADLSQE DDEMSSDDLP 120 PNGWPKTGRR SGHGKAPIIE AKKKKVEASN SGIKIGGGVS LENPKLGPES SNRGKKKLIQ 180 KRMYVCDICD RRFKSYQALG GHKSHHGSRV RVSGEEGASG TAACGTAVPD VEQEIRDQST 240 VVSFEFDLNE LPPEDDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56200.1 | 1e-15 | C2H2 family protein |