PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16876.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 271aa MW: 30575.5 Da PI: 9.4385

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.7	1.1e-06	119	138	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r nL+ H+ PIN16876.1 119 FSCHICKKTFNRYNNLQMHM 138 89*****************9 PP
2	zf-C2H2	11.5	0.00091	203	225	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +Cgk+ k + ++H +++ PIN16876.1 203 YSCRKCGKCLAVKGDWRTHEKNC 225 99*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MESTTSSGLG TISFIPFGSS KTIHNTTEPF DFFPKKPSSS SLRFSSQFDS KNQTYDQPND 60 VIENEDSDVA LHIGLPNCSN IINSSYNNGK KDANNSAEEA AKQYWIPTPT QILVGFTHFS 120 CHICKKTFNR YNNLQMHMWG HGSEFRRGPD SLKGRQPRAM VGIPCYCCEE GCKNNINHPR 180 AKPLKDFRTL QTHYKRKHGM KKYSCRKCGK CLAVKGDWRT HEKNCGKRWL CVCGSDFKHK 240 RSLKDHVASF GSGHGPSSPP TFEYGLHGNL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	1e-100	C2H2 family protein