PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 259aa MW: 28713 Da PI: 8.3672 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.9e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd l+++ +++G+g +W + +++ g+ R++k+c++rw++yl PIN16835.1 14 RGTWSPEEDSTLKNYLQKHGTGgNWISLPQKAGLQRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47 | 6.1e-15 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eE+ +++ ++ + G++ W+ Ia++++ gRt++++k++w++ PIN16835.1 69 GGFTQEEENIIYSLHSKIGSR-WSVIASHLQ-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MGRSPCCDKS KVKRGTWSPE EDSTLKNYLQ KHGTGGNWIS LPQKAGLQRC GKSCRLRWLN 60 YLRPDIKHGG FTQEEENIIY SLHSKIGSRW SVIASHLQGR TDNDVKNYWN TKLKKKLMAV 120 NCNPPSATAS GAAAATTAAT GTTTTTAIFE KTTTLRASTS SMATFPEPYE PINSTFPKFI 180 LEGSSNCSSS ANNGSPFSQS QQESSPFRPW DESHHGVKGI PMDQYSYEVL GGIWFQEESI 240 GFHSNEDLFS IFHVDSNKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 1e-72 | MYB family protein |