PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16789.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 357aa    MW: 39605.6 Da    PI: 5.085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19142192155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  PIN16789.1 142 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 192
                 59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MLPQQEEKTM LSGKRVKYSE HITQTTVVRR PEHPTSGRKN HFPEENTTRT VRITVTDADA  60
TDSSSDEEDR SFVKRQRVRR FINEVRIQPC CRDNEGVNGN ACVNGSVNGL GKSSRPSVSV  120
LKRKKSGGGK TERNAVKVGN GKKFRGVRQR PWGKWAAEIR DPLRRVRLWL GTYDTAEEAA  180
MVYDHAAIQL RGPDALTNFS TPPVKDYKTS SGYNSGEESQ NNAKSPKSVL RFASAADSQA  240
EVEVEAEAEA ESSAIFSSST STEAALVKQN DDENFSQFSI FPRDDDLFAE FENSVPVPDL  300
FHQMDLSDTV FGMDFGCSND MLTGSSTDFG FGSSTWQTDD YFQDFGDIFG SDPLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.13e-42ERF family protein