PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16766.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25754.3 Da PI: 4.7091 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5e-18 | 32 | 82 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr +k +g++v+eIr p++ r r++lg+++tae+Aa+a +aa +l+g PIN16766.1 32 CKYKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 82 79*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MVKSSVNQKE QLSSSSATIL QRVSETSSSS SCKYKGVRKR KWGKYVSEIR LPNSRERIWL 60 GSYDTAEKAA RAFDAALFCL RGRNAKFNFP DNPPEIVNGR SMTPAEIQVA AARFAHSGSG 120 PRSVGTSGRV DNLDSQSDSL SSSEQLQHAE SPCQSVSDGA AQVDTEITEI PLDDAFLDHL 180 LTLGPENNVP DFGLFSGFDN FSGDFLMSSS PNIDYWPNNN EESLYSETSF LWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 41 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 3e-57 | ERF family protein |