PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16415.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 209aa    MW: 24274 Da    PI: 9.5811
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.51.6e-151194193
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                ffk++     + ++ lvlp  f+++ +++  ++k  +l++++g +++v++  +k++++ ++++kGWk+F++ n+L+ gD +vF+++g  +f  +
  PIN16415.1 11 FFKIM--LPGF-HDKLVLPPAFCRKLKEE--KPKHAILRSPRG-TMKVNI--CKNDKGlIYFKKGWKDFADLNDLCIGDAIVFEHTGGLNF--N 94
                56666..3344.566********999755..6778*****998.799999..7777777*************************8775444..4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDEKYGVIRH FFKIMLPGFH DKLVLPPAFC RKLKEEKPKH AILRSPRGTM KVNICKNDKG  60
LIYFKKGWKD FADLNDLCIG DAIVFEHTGG LNFNAIVFDP SACEKQFPEK VNLDEHPEDV  120
ERKVDMDSGT SYNFLNPHFT ITMKRHNGLK RWATVNIPTK FLRSNDLSWY KFYTSNKLKD  180
GDVCSFELHP HSRRSKTVVM DVHINRSSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.17e-16B3 family protein