PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16262.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 322aa    MW: 35477.9 Da    PI: 9.7796
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.62.7e-30164218358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p++VNaKQy++Il+RR++Rak+e e+kl  k rkpylh SRh hA+rRpRg+gGrF
  PIN16262.1 164 PIFVNAKQYNGILRRRKSRAKAEMENKL-LKLRKPYLHLSRHLHAMRRPRGNGGRF 218
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MTMHTVFFKE YEGIAPNSIN GELSEVSRWN GLQGCQPPPT AAATYGDPFV QSKLSCSAGG  60
NQFTVAKETE DQQVLGKGNA THFTLFSGDC RTPENVAKTN LQTVSSLQPA SMEFQGHFKL  120
GFGQPLICAQ YPYPEQCYGV YSTYGTQIAG RIMLPFSMAG DGGPIFVNAK QYNGILRRRK  180
SRAKAEMENK LLKLRKPYLH LSRHLHAMRR PRGNGGRFLN TKDTNNNNNH NNDKCKKGNT  240
NENQKPHPKQ AESQVSEVLQ SEGGINNSKG TKGCSSTSPG SEVTSNVHFY QINRFDPSFQ  300
PFPNLANTRL GIAMTGGNYL KV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.12e-43NF-YA family protein