PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16180.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 268aa    MW: 30058.9 Da    PI: 9.1112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.4e-19126174355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  PIN16180.1 126 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYILRG 174
                 8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MNNKFPNMET FLQKETSSSS FPYSHMFSCL NHQTITSNDQ NNVPPNFLES VNSSNEVKST  60
PNLGLFLHNP SSPRTTKEFS DSPLSSMPQF NQKITNNPSK SCTSDCWLNT TKTQPMKKSP  120
QKSKLFRGVR QRHWGKWVAE IRLPRNRTRV WLGTFDTAEE AAFAYDTAAY ILRGDYANLN  180
FPDLTHKIKA SSVSNNIIAL LEAKLQAVGS KNKKPEEKVD AEVAGIKKSS EAVEMKKSPD  240
GVLSDVELSR MPSLDMDMIW DALSVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-51ERF family protein