PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16088.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 541aa MW: 60957.6 Da PI: 8.4388

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.7	1.6e-16	17	100	11	100
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100 l s+rl +p +f+++++g s t l+ +sg+ W v li ++ +l +GW +Fv+++ L++gD++vF++dg+ f +v++f++s PIN16088.1 17 LCSDRLNIPCNFVKHMEGRV--SGTALLTGPSGNNWYVDLI--HVESGLFLNDGWADFVRDHFLEQGDSMVFRYDGDLYF--TVQIFDRS 100 6689*******7776663..449***********5..4445699********************997666..999985 PP
2	B3	58.5	1.2e-18	234	328	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+kv+++ + + s l +p +fa+eh ++++++++l++ +g+sW+v+ i +k + ++++ +GW +Fv++n+++ gD+++F+l++ +fel+v+++r PIN16088.1 234 FLKVMKRFNISGSYTLNVPYQFATEHL--PKCKVKIVLRNIKGESWTVNSIPtTKVQTSHTFCGGWLSFVRDNNIDIGDICIFELVR--KFELHVRILR 328 6788877788888899********6..34999************875666666*********************986..9****998 PP
3	B3	51.3	2.1e-16	437	522	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 + + s l +p +f eh+ ++++++++l++++g+ W+v+ i + k ++ +++ +GW Fv++n+++ gD+++F+l+g+ e ++v+++ PIN16088.1 437 NISGSYTLKIPYQFSMEHM--PNCKTEIVLRNLNGQCWTVNSIPTIKVQTlHTFCGGWMAFVRDNDIQMGDICIFELVGKCE--MRVHIC 522 555566799****9998..55999************998888888999*********************99444..588887 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MWGVRRPHFL LGFDPSLCSD RLNIPCNFVK HMEGRVSGTA LLTGPSGNNW YVDLIHVESG 60 LFLNDGWADF VRDHFLEQGD SMVFRYDGDL YFTVQIFDRS MCEKEAAFTA ESSQDLSKYD 120 SNMVKKRDRE RSALLDSIIE GVPKKMRCCQ MQSESMCNDH ENGRNVTDAE EWMQQTNGNN 180 NFKNAVTVAL PLSIVPHDSP DPSVRNRTTK LDMLLSASEA ERIARSFTSS FPNFLKVMKR 240 FNISGSYTLN VPYQFATEHL PKCKVKIVLR NIKGESWTVN SIPTTKVQTS HTFCGGWLSF 300 VRDNNIDIGD ICIFELVRKF ELHVRILRVG KEGIDGHDGE AAQGGRNNGC TTTNKTSRRK 360 SKKMSESADS IKGSAICSQS NNSIAELEIH KRFGPPDKQG SQTKGCVSMK SAPEEKIAAQ 420 YFVSSYPHFV RVMKKFNISG SYTLKIPYQF SMEHMPNCKT EIVLRNLNGQ CWTVNSIPTI 480 KVQTLHTFCG GWMAFVRDND IQMGDICIFE LVGKCEMRVH ICGIGKKGLN YQNGTKGLPM 540 P

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MWGVRRPHFL LGFDPSLCSD RLNIPCNFVK HMEGRVSGTA LLTGPSGNNW YVDLIHVESG  60
LFLNDGWADF VRDHFLEQGD SMVFRYDGDL YFTVQIFDRS MCEKEAAFTA ESSQDLSKYD  120
SNMVKKRDRE RSALLDSIIE GVPKKMRCCQ MQSESMCNDH ENGRNVTDAE EWMQQTNGNN  180
NFKNAVTVAL PLSIVPHDSP DPSVRNRTTK LDMLLSASEA ERIARSFTSS FPNFLKVMKR  240
FNISGSYTLN VPYQFATEHL PKCKVKIVLR NIKGESWTVN SIPTTKVQTS HTFCGGWLSF  300
VRDNNIDIGD ICIFELVRKF ELHVRILRVG KEGIDGHDGE AAQGGRNNGC TTTNKTSRRK  360
SKKMSESADS IKGSAICSQS NNSIAELEIH KRFGPPDKQG SQTKGCVSMK SAPEEKIAAQ  420
YFVSSYPHFV RVMKKFNISG SYTLKIPYQF SMEHMPNCKT EIVLRNLNGQ CWTVNSIPTI  480
KVQTLHTFCG GWMAFVRDND IQMGDICIFE LVGKCEMRVH ICGIGKKGLN YQNGTKGLPM  540
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-19	B3 family protein