PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16087.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 389aa MW: 44045.5 Da PI: 7.0978

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.3	3.8e-20	31	114	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++ l +pkkf+++ +k +t++l+ +sg +W+v l k+++ +l+ GW+ Fv+++gL+e+D+++Fk++g+s+f v++f++ PIN16087.1 31 GRFREH-LAIPKKFTNSLREK--MLQTVSLRGPSGHVWNVGL--VKNGDVLFLKLGWNAFVEDHGLQENDILIFKYSGDSRF--DVSIFDQ 114 455666.9****9777655..5569***********..********************************9999..9999986 PP
2	B3	49.7	6.6e-16	237	331	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 f v+ ps+v k +++p + a+++ + es+ l+ + ++W k+ y++++g+ lt+GW++Fv +n L++ D+++F+++ g+ + f l vk+f PIN16087.1 237 FTVVMRPSHVYKGFFMSIPAEWAKANLPSRDESIVLR---VKDQEWLAKYHYKGYGGG--LTGGWRNFVMDNFLEAFDVCLFEHSkGTdNAFILDVKIF 330 77899****************99943333444444...4669***9999..9*********************9966678888888888 PP - CS B3 98 r 98 r PIN16087.1 331 R 331 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVGNCVECRK CEENMYWSRF RTVQFCQFLS GRFREHLAIP KKFTNSLREK MLQTVSLRGP 60 SGHVWNVGLV KNGDVLFLKL GWNAFVEDHG LQENDILIFK YSGDSRFDVS IFDQGSLCEK 120 EACYFVKKCE HAVIGQGSKR RRSMQESSED TTESSDGAAD CQLIEKIQSG SARKDTSGAK 180 LTQSTPRRRR KTKKGRRGSG ESNVFQLKSR RRKVTEEEIK RAAEMANAAA AASADCFTVV 240 MRPSHVYKGF FMSIPAEWAK ANLPSRDESI VLRVKDQEWL AKYHYKGYGG GLTGGWRNFV 300 MDNFLEAFDV CLFEHSKGTD NAFILDVKIF RVIQEVIPPC RTRGGGDTSR EDTPRGALKQ 360 LGKSVRDSTD EEIDDDEDDD DDEEAEENV

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVGNCVECRK CEENMYWSRF RTVQFCQFLS GRFREHLAIP KKFTNSLREK MLQTVSLRGP  60
SGHVWNVGLV KNGDVLFLKL GWNAFVEDHG LQENDILIFK YSGDSRFDVS IFDQGSLCEK  120
EACYFVKKCE HAVIGQGSKR RRSMQESSED TTESSDGAAD CQLIEKIQSG SARKDTSGAK  180
LTQSTPRRRR KTKKGRRGSG ESNVFQLKSR RRKVTEEEIK RAAEMANAAA AASADCFTVV  240
MRPSHVYKGF FMSIPAEWAK ANLPSRDESI VLRVKDQEWL AKYHYKGYGG GLTGGWRNFV  300
MDNFLEAFDV CLFEHSKGTD NAFILDVKIF RVIQEVIPPC RTRGGGDTSR EDTPRGALKQ  360
LGKSVRDSTD EEIDDDEDDD DDEEAEENV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	193	RRRKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	8e-49	B3 family protein