PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Dof | ||||||||
Protein Properties | Length: 250aa MW: 26431.3 Da PI: 7.7646 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.3 | 3.9e-39 | 49 | 108 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+rk +ss PIN16077.1 49 PEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGALRNVPVGGGTRKTASSS 108 57899**************************************************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MDSLLNSSSS PESMKKHKPT PTLPPKSPDV VSESGERRHS RLGSRTSEPE HLPCPRCDST 60 NTKFCYYNNY NLSQPRHFCK SCRRYWTRGG ALRNVPVGGG TRKTASSSNK RPRVATPATT 120 SNDNDVAGKT EVLDPVALNP NPVSGSVDGA PANLNEAKSA SLSCWWSGGL FPLNSYGVGY 180 GPGLGYDHGI LNWPMEEVGG GDGGAAVLPD ESSGCSTWQM GGGAEGGGVA EGDYFAWPEL 240 AISTPARALK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66940.1 | 6e-35 | Dof family protein |