PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16069.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 284aa    MW: 32626.6 Da    PI: 8.9715
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.6e-15134180147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+eE+  ++d+ +++G+g+Wk+I+ +   ++t+ q+ s+ qky
       PIN16069.1 134 RVPWTEEEHRSFLDGLNKFGKGNWKSISMHCVRTKTPTQVASHAQKY 180
                      789************************999988*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MERPYYLSEE DSLHGPLSPL LERENKSSQW TYEENKLFEN CLAEIKPLSP DFFEKVAAII  60
PSKSMQQIKN HYQALVEDVE MIKSGNFPLP DYSNHDRVDE KEKENDQIER KKKEESPSQV  120
TTKTRNNGGQ RRRRVPWTEE EHRSFLDGLN KFGKGNWKSI SMHCVRTKTP TQVASHAQKY  180
FQRQTSSIPI HRRSPSINDI RPANPTTTFT PSLPQIGHGN LTLSINLILY QIFNGEIHVQ  240
KNPDFNLPMY PDLARAGGSI FNHGGSGDFT TSFIFPSPRN QQRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-39MYB family protein