PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 25192.1 Da PI: 7.2605 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.5 | 8.6e-07 | 201 | 226 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 h+++Er RR+ri +++ L+el+P+a PIN15866.1 201 HSIAERLRRERIAERMKALQELVPNA 226 99**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MNNINPLLNQ PQFQEMQVPQ ILASSHFDPA ASHDDFLEQM LSSVPSSSAT FPWADDQAPQ 60 LEEQSAAVLA SKLRQNQISN GAAKALMFQQ QLLLSRAVAA TNGMPLGDHN DVVDGNPFKS 120 PNPANDASVK ALFNGFTGSL GQTSNLSQHF HHPQSQNFGT AGAAPTPATD QPAASGSSGG 180 GAGAQPKQRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPNANKVF SLLPLT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 211 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24260.1 | 7e-11 | bHLH family protein |