PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | SBP | ||||||||
Protein Properties | Length: 138aa MW: 15509.4 Da PI: 10.465 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.2 | 8.6e-42 | 25 | 101 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +C ve+C adls +k+yh+rh+vCevh+kapv+lv+gl+qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk++ PIN15739.1 25 CCLVENCGADLSGCKKYHQRHRVCEVHAKAPVALVEGLRQRFCQQCSRFHELSEFDQTKRSCRRRLAGHNERRRKSS 101 6**************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSLGEGSGKR NGRGGGGGGV APPPCCLVEN CGADLSGCKK YHQRHRVCEV HAKAPVALVE 60 GLRQRFCQQC SRFHELSEFD QTKRSCRRRL AGHNERRRKS SLESQKDGSS RRLKENQFRH 120 LREGNEIGSR GNQNYHIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 3e-39 | SBP family protein |