PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15701.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 856aa MW: 94785.6 Da PI: 8.1432

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.4	1.4e-28	534	584	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle l++yF++++k+AA+++gvc+T+LKriCRq+GI+RWP+Rkik++ PIN15701.1 534 EKTISLELLRQYFAGSLKEAARSIGVCPTTLKRICRQHGISRWPSRKIKKV 584 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
MDEFSGSRSQ NLEQAHHSVS LNQSANSVAE EGQVNRRLWV GPNRNPITTN SVKKRLVQAV 60 NCLKDTIRDK DVLIQIWIPV KRGSRQVLTT NNQPFSLNPN CKNLADYRDV SENYLFAVDT 120 DSKEFVGLPG RVFLKKLPEW TPDVRFFKRE EYPSVNHAQQ YDVRGSLALP VFEQGSGICL 180 GVVEIVMTSV KVNYRPELEN VCKALEAVDL KSSDIRSPSS IEDRDQTYQG TLAEIKSVLK 240 LLCDTHKLPL AQTWASCVQQ SKGGCQHSDE NYASCVSTID LTCYVADPQV SGFHEACSEH 300 HLIKSEGVVG KAFLTNQLCF AEDITAFSKT EYPLAHYARV FNLCASAAIR LRSTYNGTAA 360 DFVLEFFLPV DCKDAKDQML LVDSLSSVIQ QTCQCLRVIT DQELAQETSG SESGSTSSGR 420 LQGEKHPKLA TSPSKESSSW IMSMRHPKEK GKGVAIASGD HKEEPEGEFK AAAQWHNSGL 480 DLHHVPTILE HEQLRHDSGT KRFAEGSGNF SFTIGHYSSG AKKTSSEKRR TKTEKTISLE 540 LLRQYFAGSL KEAARSIGVC PTTLKRICRQ HGISRWPSRK IKKVGHSLRK LQLVIDSVKG 600 ADIQLGSFYN NFPELVSPNV PGSSQLPKPK MSDHMQQENN QPEGTLLSPT ASASIAPSSS 660 GSHSSSSSFC YSTGVKQSSL PVAGASHGDA LPAEKTEGVL KRAWSVAELQ GKEKEETKPL 720 FRRSYSHRII SNQVPTEAQA MQKNSKQEHH VGTFRVKASF GEEKIRLSLP PHWGFKDLQR 780 EVLRRFNIDD GSGSITLKYL DDDSEWVLLT CDADLEECTD IHRSSKSRRI KLSVHQAHHP 840 NLGSSFGSNG ASYSGF

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

MDEFSGSRSQ NLEQAHHSVS LNQSANSVAE EGQVNRRLWV GPNRNPITTN SVKKRLVQAV  60
NCLKDTIRDK DVLIQIWIPV KRGSRQVLTT NNQPFSLNPN CKNLADYRDV SENYLFAVDT  120
DSKEFVGLPG RVFLKKLPEW TPDVRFFKRE EYPSVNHAQQ YDVRGSLALP VFEQGSGICL  180
GVVEIVMTSV KVNYRPELEN VCKALEAVDL KSSDIRSPSS IEDRDQTYQG TLAEIKSVLK  240
LLCDTHKLPL AQTWASCVQQ SKGGCQHSDE NYASCVSTID LTCYVADPQV SGFHEACSEH  300
HLIKSEGVVG KAFLTNQLCF AEDITAFSKT EYPLAHYARV FNLCASAAIR LRSTYNGTAA  360
DFVLEFFLPV DCKDAKDQML LVDSLSSVIQ QTCQCLRVIT DQELAQETSG SESGSTSSGR  420
LQGEKHPKLA TSPSKESSSW IMSMRHPKEK GKGVAIASGD HKEEPEGEFK AAAQWHNSGL  480
DLHHVPTILE HEQLRHDSGT KRFAEGSGNF SFTIGHYSSG AKKTSSEKRR TKTEKTISLE  540
LLRQYFAGSL KEAARSIGVC PTTLKRICRQ HGISRWPSRK IKKVGHSLRK LQLVIDSVKG  600
ADIQLGSFYN NFPELVSPNV PGSSQLPKPK MSDHMQQENN QPEGTLLSPT ASASIAPSSS  660
GSHSSSSSFC YSTGVKQSSL PVAGASHGDA LPAEKTEGVL KRAWSVAELQ GKEKEETKPL  720
FRRSYSHRII SNQVPTEAQA MQKNSKQEHH VGTFRVKASF GEEKIRLSLP PHWGFKDLQR  780
EVLRRFNIDD GSGSITLKYL DDDSEWVLLT CDADLEECTD IHRSSKSRRI KLSVHQAHHP  840
NLGSSFGSNG ASYSGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein