PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15615.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 297aa MW: 33139.6 Da PI: 6.5153

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.9	6.5e-33	66	144	2	80
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaessss 80 a+k+drhsk++T++g+RdRRvRls ++a++f+d+qd+LG+d++sk+i+WL+++ak ai++l +++ +a+++e+ + + PIN15615.1 66 APKRDRHSKVSTAKGPRDRRVRLSPKTAIQFYDVQDRLGYDRPSKAIDWLIKEAKSAIDALDKQPLFAANASENLQTHD 144 89*************************************************************9655555553333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MYSPSKQLHT AEDDDQPEDG DNPTRKNAVI KELMQENSNL ASPKSKSKKR KAEVIEVHGG 60 RIIHSAPKRD RHSKVSTAKG PRDRRVRLSP KTAIQFYDVQ DRLGYDRPSK AIDWLIKEAK 120 SAIDALDKQP LFAANASENL QTHDYLDYEN SAFGFGFFLD GSPSRNRYKA ENAIFQPNYE 180 QGFCSALTTN SQELNTNWEM VEFQGNFTCH CAGENSAGGG PPYSSSNSLP VHSPAEPVYQ 240 REPLQSSIIN YSPISTCLSG FDFSDELSNI TAAAGSKEDK SVFRRQFSAA PFLHYEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	51	PKSKSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	1e-35	TCP family protein