PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15605.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 553aa    MW: 63141.8 Da    PI: 4.9521
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS281.72.1e-861865512374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshlta 98 
                  +lLl + e v ++++ la++l++r   +as +g+p+qR+++yf eAL+++++r++ +  ++ + ++++ ++     + + + + ++  P+ ++ +++ 
  PIN15605.1 186 LRLLLVAGEYVGTQHFDLANKLISRCLWMASGSGSPVQRVVFYFSEALQEKINRESGRRININEKKRKP-EKglALGTNNTFLATHQGLPFSQVMQFAG 283
                 57899999**********************************************444444344333333.3323333334444468889********** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  q I e v++++++H iD++i  G+QW aL+q La+   +  +l+iT+vg    ++++ +eetg rL +fA++l++pf+f+v++++++ ++e + L+++
  PIN15605.1 284 IQSIIENVKTAQKIHLIDLQIRSGIQWTALMQGLAEC--KIQHLKITAVGT---VDQRYMEETGTRLLNFANSLNLPFSFKVVYVTDMREFEESLLDIE 377
                 ***********************************95..567*********...79******************************************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                  ++++aV +  +l ++ ++s  les    v++ + +l+P ++vv+e ea+hns+sF++rf+eal +ysa+fd+le  + r+se r+ +E+ ++g+ ivn
  PIN15605.1 378 ADDTVAVYSYTMLRSMISKSDVLES----VMRSITRLKPALMVVIEVEANHNSPSFVDRFIEALLFYSAFFDCLEDCMERNSEYRRILEETYFGEGIVN 472
                 *****************88888888....********************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +va+ g+er+ r+ +l  Wr+ ++++G+ +++lse+   qa+l++++++ +   ++e++ + l+ gWk+ pL s++aW+
  PIN15605.1 473 IVAADGQERITRNIKLDVWRAFFKRFGMIEIELSESSKYQASLVVKQFAqGSSCTLECNGKGLTVGWKGTPLHSLTAWK 551
                 *************************************************88889************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    
MSMADAVFSS FQFTAGDYDP RQEAISTNKQ VDQWFEMDDS GLMELFSSVF DEENNNDTME  60
KKYESLRNLP PNVSDDFWNE IISEEIEENL EAKQHHHLKQ KPRSFSLASC DRLMSDYGNI  120
LTMPREGNMN NTGERKLSMD EILRLAGERF IQFSTNRVDG ISMFIHPYGS FLSGLSMDDT  180
RDVELLRLLL VAGEYVGTQH FDLANKLISR CLWMASGSGS PVQRVVFYFS EALQEKINRE  240
SGRRININEK KRKPEKGLAL GTNNTFLATH QGLPFSQVMQ FAGIQSIIEN VKTAQKIHLI  300
DLQIRSGIQW TALMQGLAEC KIQHLKITAV GTVDQRYMEE TGTRLLNFAN SLNLPFSFKV  360
VYVTDMREFE ESLLDIEADD TVAVYSYTML RSMISKSDVL ESVMRSITRL KPALMVVIEV  420
EANHNSPSFV DRFIEALLFY SAFFDCLEDC MERNSEYRRI LEETYFGEGI VNIVAADGQE  480
RITRNIKLDV WRAFFKRFGM IEIELSESSK YQASLVVKQF AQGSSCTLEC NGKGLTVGWK  540
GTPLHSLTAW KFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-58GRAS family protein