PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15566.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 301aa    MW: 33343.2 Da    PI: 6.2564
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.28.2e-34158215259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp+vv++tYeg+H+h+
  PIN15566.1 158 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSCNDPTVVVTTYEGQHTHP 215
                 8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MKECGIKMED CYYYPLMSNN TVLESGGEGE KGCSSLGFME LLNMQDFGGT PYDEELQNSV  60
SSVGPLIRSS DDQGLRTRIK ESAEVVNAPA TPNSSSISSE SSAGVQNDEG TIKEEVEEQD  120
DGENQKIKKE LKVKKTSKKR QREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPFPRSY  180
YRCTSASCNV KKRVERSCND PTVVVTTYEG QHTHPSPVMP RSPATFSLPP YAGGATPSQL  240
QAQMVLSHHF NFNCGFTGST SSVNYSGGGA QFCSPYSSGL MMDHGLLQDM VPWSIIKKEE  300
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-48WRKY family protein