PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 29398.2 Da PI: 7.568 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 6.1e-16 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd +l+++++ +G g+W+ ar g++Rt+ +c+ rw +yl PIN15552.1 30 RGAWSFEEDSILINYIAIHGEGQWSHLARNAGLNRTGRSCRMRWKNYL 77 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 83 | 126 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+ ++++++ +G++ W++Ia++++ +Rt++++k++w++ PIN15552.1 83 RGNFTPEEQVRILELHCHYGNR-WSKIAQHLP-KRTDNEIKNYWRT 126 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MLMDLKTLEA INNVVSCQDK KEETNIRVRR GAWSFEEDSI LINYIAIHGE GQWSHLARNA 60 GLNRTGRSCR MRWKNYLQPN IRRGNFTPEE QVRILELHCH YGNRWSKIAQ HLPKRTDNEI 120 KNYWRTRVRK QAKLLKCDIN SFEFREFIRT MWLPILSEQI RASKPHGDPA NGVDDTINRP 180 GPVNMDYSAG WCGDGLLEPV EAHPVSGMEE LSKNSGWLDD DVFRVGYGLH GFESPEWFNY 240 KELSDGYFWL SP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 2e-64 | MYB family protein |