PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15356.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 526aa MW: 56180.7 Da PI: 7.6519

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.6	3e-40	149	274	3	99
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 + k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ PIN15356.1 149 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTLSAPpsksaphsfhsa 247 6799****************************************************************9998777888887755555555566777766 PP TCP 89 ......................kaaksaakskk 99 + ++++ PIN15356.1 248 lglahhpyanyeenfshmlgfhH------HQQQ 274 66777777776666543322211......1111 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MELTDSKTNN QQQSSSSSTT TTTSSTIPTT ASAASQPYNV APPHLLHRLH GRSPPFITSL 60 HGGAGASGSS SSPASTSSTT PVSASSSAQQ QPPQLLDASL AIATRSETLI DHPTSKRPSQ 120 QAPQQQQQQQ QQQQVQPPPP EQQQTQQQPP KRSTKDRHTK VDGRGRRIRM PATCAARVFQ 180 LTRELGHKSD GETIEWLLQQ AEPAIIAATG TGTIPANFST LNISLRSSGS TLSAPPSKSA 240 PHSFHSALGL AHHPYANYEE NFSHMLGFHH HQQQQQQQQQ PPHLLQAAQI TETLAATGGE 300 QQATENYLRK RYREDLFKEE GPNNSQGEGP SSPSNKQFKT LNNVQIMQKN QEAAGQSPGS 360 LMRHSNMMPA TAMWAVTPAP SSGATGSTFW MLPVTASAGG AQTLAAVSSG QAASPSEAAQ 420 MWPFATAHGG GNTLQAPLHF MPRFNYSGNL EFQGGRASPL QLGSILMQQQ QQQPSQNLGL 480 GVSGESNLGM LAALNAYSRS GLNMNNENLE QTQASDSEDD GQNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MELTDSKTNN QQQSSSSSTT TTTSSTIPTT ASAASQPYNV APPHLLHRLH GRSPPFITSL  60
HGGAGASGSS SSPASTSSTT PVSASSSAQQ QPPQLLDASL AIATRSETLI DHPTSKRPSQ  120
QAPQQQQQQQ QQQQVQPPPP EQQQTQQQPP KRSTKDRHTK VDGRGRRIRM PATCAARVFQ  180
LTRELGHKSD GETIEWLLQQ AEPAIIAATG TGTIPANFST LNISLRSSGS TLSAPPSKSA  240
PHSFHSALGL AHHPYANYEE NFSHMLGFHH HQQQQQQQQQ PPHLLQAAQI TETLAATGGE  300
QQATENYLRK RYREDLFKEE GPNNSQGEGP SSPSNKQFKT LNNVQIMQKN QEAAGQSPGS  360
LMRHSNMMPA TAMWAVTPAP SSGATGSTFW MLPVTASAGG AQTLAAVSSG QAASPSEAAQ  420
MWPFATAHGG GNTLQAPLHF MPRFNYSGNL EFQGGRASPL QLGSILMQQQ QQQPSQNLGL  480
GVSGESNLGM LAALNAYSRS GLNMNNENLE QTQASDSEDD GQNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-73	TCP family protein