PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15345.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 393aa MW: 42649.2 Da PI: 8.5665

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.9e-05	156	178	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L++H+ + H PIN15345.1 156 ACSECGEVFPKIESLEHHQAVrH 178 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MALLTFLPEP SPHKNTPKSK RKKKERHHQP SSWDQIKILL TCKQIEDSKV HDPSRTNSVY 60 SSCSDICSFR DVVHGNTRVV HRADNSPGSS SLGQETRLLS KKSSHGSHSS NSVKSGGGGA 120 SYTGRGIQLR RLSGCYECHA IVDPSRYPLP RTTVCACSEC GEVFPKIESL EHHQAVRHAV 180 SELGPEDSSR NIVEIIFKSS WLKMDNPICN IERILKIHNT QRTIQRFEDY RDAVKTRANS 240 NAKRNARCAA DGNELLRFHC ATLTCSLGEG GSSSLCGSIP ACGVCTIIRH GFQGSKINGI 300 RTTASSGRAH DCLGGSDTRR AMLVCRVIAG RVKRVTEDPA GVDDDEGGAS PAGGACDSVA 360 GCAGVYSNLE ELYVFSSRAI LPCFVVVYKS LEC

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MALLTFLPEP SPHKNTPKSK RKKKERHHQP SSWDQIKILL TCKQIEDSKV HDPSRTNSVY  60
SSCSDICSFR DVVHGNTRVV HRADNSPGSS SLGQETRLLS KKSSHGSHSS NSVKSGGGGA  120
SYTGRGIQLR RLSGCYECHA IVDPSRYPLP RTTVCACSEC GEVFPKIESL EHHQAVRHAV  180
SELGPEDSSR NIVEIIFKSS WLKMDNPICN IERILKIHNT QRTIQRFEDY RDAVKTRANS  240
NAKRNARCAA DGNELLRFHC ATLTCSLGEG GSSSLCGSIP ACGVCTIIRH GFQGSKINGI  300
RTTASSGRAH DCLGGSDTRR AMLVCRVIAG RVKRVTEDPA GVDDDEGGAS PAGGACDSVA  360
GCAGVYSNLE ELYVFSSRAI LPCFVVVYKS LEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-150	C2H2 family protein