PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15196.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 378aa    MW: 42435.3 Da    PI: 7.9068
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH222.8e-07128148526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C+ f++ G+C+ Gd+C F+Hg
  PIN15196.1 128 VCSEFRK-GHCSKGDNCEFSHG 148
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MMSTICPEQQ HKFHNSHQLY LTKKSLRDID IPPRKLLSRA RSSSAADYSF IDSPKAEDHA  60
VFSKFLPYNN VDDDDSDPYS SDHFRMYEFK VRKCNRSRSH DWTDCPFAHP GEKARRRDPR  120
RYHYSGTVCS EFRKGHCSKG DNCEFSHGVF ECWLHPSRYR TEACKDGKNC KRKVCFFAHS  180
TRQLRILPDT SPVGSPKAAE EKKYRNLNNL NPCCVFCHSM AASPTSTLMG MSPHGSFCSP  240
DFSLSGDRYV FSEYAAPACS GGMSYKDALT ELMASLEAMN VNEGACSTTP SPSGSKNGNN  300
LTWLDVNFNV EEQPQFVLSP STATPSPRRG LSKLWSGDGK LLQGDFSGRN LMDDVSRYNN  360
NESNSGGPDL GWVNDLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-82C3H family protein