PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15057.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 326aa    MW: 35860.7 Da    PI: 9.225
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-19231264134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  PIN15057.1 231 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGR 264
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTMVEPGNCW DAVANGIAGD EEFENILSIL DFPMETLEGD GFVGDWDISK SQCLGPIPSN  60
VLMGLPTIPN SKINTGPSSL LSEPVVPITV PPEQKPLSNR IEASGPHINL QNKPSEVQES  120
SGFQTQSPVS VLESSGSCSV AKSLPIKSQK AIPVRTRSKR IRPTGANPWL LISPFFSASK  180
KTSNARKEKE RRKKLSQTPH TPETEESSLQ ASNYRNLQNA SSQRPVATKK CTHCEVTKTP  240
QWREGPLGPK TLCNACGVRY RSGRLFPEYR PAASPTFVPS LHSNSHKKVV EMRNKAKQSA  300
TKTEEPPISP QPEFIPMSSY LFDYIY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160RTRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.27e-55GATA family protein