PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15056.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 652aa MW: 71782.8 Da PI: 8.2126

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.2	3.1e-23	111	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++++ ++ +d +g+sW++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++el PIN15056.1 111 FAKILTQSDANNGGGFSVPRYCAETIfprldytAEPPAQ--NVIAKDVHGESWQFRHIYRGTPRRHLLTTGWSAFVNHKKLVAGDSIVFL--RAENGEL 205 89**************************997666666..6********************************************..4499999 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ PIN15056.1 206 CIGMRRA 212 *9986 PP
2	Auxin_resp	102.7	4.5e-34	251	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa a+++++Fev Y+Pr st+eF vk+++v++a+++ + Gm+fkm+fe+ed s++ + +Gtvv+v+ +dp+rWpnS+Wr+L+ PIN15056.1 251 AAYLAANGQPFEVAYYPRCSTPEFFVKASSVNAAMRIDWFSGMKFKMQFESEDLSKICWfTGTVVSVQSADPLRWPNSPWRMLQ 334 677899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MEEAVEKTLN SELWHACAGA LVQIPPVNSK VFYFPQGHAE HTLTTVDFGA LPRIPLILCR 60 VAAVKYLADP ETDEVYAKIR LIPVGNNEAR FDEDPVMGST GSVSNENANS FAKILTQSDA 120 NNGGGFSVPR YCAETIFPRL DYTAEPPAQN VIAKDVHGES WQFRHIYRGT PRRHLLTTGW 180 SAFVNHKKLV AGDSIVFLRA ENGELCIGMR RAKKGSGRYS SYLKDDENKV MPRSFSPREK 240 GKVRPESVVE AAYLAANGQP FEVAYYPRCS TPEFFVKASS VNAAMRIDWF SGMKFKMQFE 300 SEDLSKICWF TGTVVSVQSA DPLRWPNSPW RMLQVAWEEP GLLQSVKCVS PWLVELVSNM 360 PALHLAPFSP PRRKLRLPHH SDFAFDGQLP MPSFSGTALG PSSPLCRLPD NITAGIQGAR 420 HAQIGVPLLD FHLSNKLQMG LSLPSFLRLE PRAKISDTMA RSSADGNKNV SCVLSIGNSS 480 HKTEKTDGSN APMFVLFGQP ILTEQQMCNV AQAKDSARDH KDPPRSSSGA FNASELSLDA 540 GHCKVFLEAE DVGRSLELSI LGSYEELYKK LENMFGIGRS EMPSHVFYRD ATGALKQTGD 600 EPFSEFVKTA KRLTILMKPG NNNAERKLIT GLPTAERGLA SSNKTGPLGI IA

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MEEAVEKTLN SELWHACAGA LVQIPPVNSK VFYFPQGHAE HTLTTVDFGA LPRIPLILCR  60
VAAVKYLADP ETDEVYAKIR LIPVGNNEAR FDEDPVMGST GSVSNENANS FAKILTQSDA  120
NNGGGFSVPR YCAETIFPRL DYTAEPPAQN VIAKDVHGES WQFRHIYRGT PRRHLLTTGW  180
SAFVNHKKLV AGDSIVFLRA ENGELCIGMR RAKKGSGRYS SYLKDDENKV MPRSFSPREK  240
GKVRPESVVE AAYLAANGQP FEVAYYPRCS TPEFFVKASS VNAAMRIDWF SGMKFKMQFE  300
SEDLSKICWF TGTVVSVQSA DPLRWPNSPW RMLQVAWEEP GLLQSVKCVS PWLVELVSNM  360
PALHLAPFSP PRRKLRLPHH SDFAFDGQLP MPSFSGTALG PSSPLCRLPD NITAGIQGAR  420
HAQIGVPLLD FHLSNKLQMG LSLPSFLRLE PRAKISDTMA RSSADGNKNV SCVLSIGNSS  480
HKTEKTDGSN APMFVLFGQP ILTEQQMCNV AQAKDSARDH KDPPRSSSGA FNASELSLDA  540
GHCKVFLEAE DVGRSLELSI LGSYEELYKK LENMFGIGRS EMPSHVFYRD ATGALKQTGD  600
EPFSEFVKTA KRLTILMKPG NNNAERKLIT GLPTAERGLA SSNKTGPLGI IA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein